STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMAR_1972Conserved hypothetical membrane protein. (271 aa)    
Predicted Functional Partners:
MMAR_1971
Conserved 35 kDa alanine rich protein; Function unknown but domain identity to COG1842, PspA, phage shock protein a (IM30), suppresses sigma54- dependent transcription.
  
  
 0.909
MMAR_1970
Transcriptional regulatory protein; Possibly involved in transcriptional mechanism.
     
 0.793
MMAR_4545
Conserved transmembrane protein.
  
     0.769
lppL
Conserved lipoprotein LppL.
  
     0.765
MMAR_2292
Conserved hypothetical protein.
  
     0.752
MMAR_4866
Conserved protein.
  
     0.750
MMAR_5220
Conserved hypothetical secreted protein.
  
     0.749
MMAR_0746
Tuberculin related peptide.
  
     0.748
erp
Exported repetitive protein precursor Erp; Surface-exposed protein required for multiplication and intracellular growth. seems to play a role in virulence.
  
     0.746
MMAR_4650
Transmembrane protein.
  
     0.745
Your Current Organism:
Mycobacterium marinum
NCBI taxonomy Id: 216594
Other names: M. marinum M, Mycobacterium marinum M, Mycobacterium marinum str. M, Mycobacterium marinum strain M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.