STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMAR_1997Conserved hypothetical hydrolase; Function unknown, probably involved in cellular metabolism. (341 aa)    
Predicted Functional Partners:
MMAR_1996
Conserved hypothetical protein; Function unknown but contains identity to an epimerase involved in phenazine biosynthesis.
  
    0.803
MMAR_1998
Conserved protein.
       0.785
MMAR_1999
Conserved hypothetical secreted protein; Function unknown but contains weak similarity to V8- like Glu-specific endopeptidases involved in amino acid transport and metabolism.
       0.671
MMAR_1180
N-term fused in-frame with fatty acyl-AMP ligase FadD28_1; Synthesis of unknown polyketide.
  
 0.632
MMAR_3099
Polyketide synthase and peptide synthetase; Production of unknown metabolite. this CDS encodes a single NRP and PKS module with domain structure: (KS, Ata, DH, ER, KR, ACP).
  
 0.632
MMAR_0244
Methyltransferase/methylase; Thought to cause methylation.
     
 0.556
MMAR_4771
Conserved membrane protein; Function unknown, predicted hydrolase or acyltransferase domain.
  
     0.522
hpx
Non-heme haloperoxidase Hpx; Supposed involved in detoxification reactions.
  
   
 0.510
bphC
Biphenyl-2,3-diol 1,2-dioxygenase BphC; Involved in the degradation of biphenyl [catalytic activity: biphenyl-2,3-diol + O(2) = 2-hydroxy-6-OXO-6- phenylhexa-2,4-dienoate + H(2)O].
  
  
 0.481
ppsC
Phenolpthiocerol synthesis type-I polyketide synthase PpsC; Involved in phenolpthiocerol and phthiocerol dimycocerosate (dim) biosynthesis: extension with Malony CoA (complete reduction).
  
 0.475
Your Current Organism:
Mycobacterium marinum
NCBI taxonomy Id: 216594
Other names: M. marinum M, Mycobacterium marinum M, Mycobacterium marinum str. M, Mycobacterium marinum strain M
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.