STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMAR_2001Conserved hypothetical protein. (355 aa)    
Predicted Functional Partners:
sthA
Soluble pyridine nucleotide transhydrogenase SthA; Conversion of NADPH, generated by peripheral catabolic pathways, to NADH, which can enter the respiratory chain for energy generation [catalytic activity: NADPH + NAD(+) = NADP(+) + NADH].
       0.747
MMAR_2044
Conserved hypothetical membrane protein.
  
     0.703
MMAR_4356
Conserved protein.
  
     0.702
MMAR_4866
Conserved protein.
  
     0.699
MMAR_2292
Conserved hypothetical protein.
  
     0.694
MMAR_4215
Conserved hypothetical protein.
  
     0.690
lpqB
Conserved lipoprotein LpqB.
  
     0.675
MMAR_1345
Conserved alanine and valine rich protein.
  
     0.673
MMAR_3077
Conserved membrane protein.
  
     0.673
MMAR_4085
Conserved hypothetical protein.
  
     0.671
Your Current Organism:
Mycobacterium marinum
NCBI taxonomy Id: 216594
Other names: M. marinum M, Mycobacterium marinum M, Mycobacterium marinum str. M, Mycobacterium marinum strain M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.