STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMAR_2132Conserved hypothetical protein; Function unknown, domain homology suggests role in initiation of plasmid replication. (113 aa)    
Predicted Functional Partners:
MMAR_2130
Replication initiator protein; Initiation of DNA replication for an episomal element.
 
   
 0.900
MMAR_3125
Conserved hypothetical protein; Function unknown, signficant identity with putative plasmid replication initiator protein [streptomyces coelicolor A3(2)].
 
   
 0.797
MMAR_2131
DNA segregation ATPase FtsK/SpoIIIE related protein; Possible role in DNA segregation during cell division.
 
   
 0.790
MMAR_3126
FtsK/SpoIIIE family protein; Possible role in phage DNA replication. the FtsK/SpoIIIE family contains a putative ATP binding P-loop motif. it is found in the FtsK cell division protein from E. coli and the stage III sporulation protein E SpoIIIE, which has roles in regulation of prespore specific gene expression in B. subtilis. a mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification. the SpoIIIE protein is implicated in intercellular chromosomal DNA transfer.
 
   
 0.642
MMAR_1569
Conserved hypothetical regulatory protein.
  
     0.628
MMAR_2133
Conserved hypothetical protein.
       0.468
MMAR_2134
Transcriptional regulatory protein.
       0.441
MMAR_2031
Conserved protein.
  
     0.418
Your Current Organism:
Mycobacterium marinum
NCBI taxonomy Id: 216594
Other names: M. marinum M, Mycobacterium marinum M, Mycobacterium marinum str. M, Mycobacterium marinum strain M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.