Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MMAR_2136Conserved hypothetical metal transport protein. (237 aa)    
Predicted Functional Partners:
MMAR_2137
Conserved hypothetical metal transport protein; Function unknown; possibly involved in transport of metal ions across the membrane.
 
 
 0.579
MMAR_0985
Alpha-mannosidase activity: hydrolysis of terminal non-reducing alpha-D-mannose residues in alpha-D- mannosides.
  
    0.554
mdh
Malate dehydrogenase Mdh; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
    0.540
MMAR_2139
Transcriptional regulatory protein; Involved in transcriptional mechanism. probably ArsR-family.
 
   
 0.493
cmk
Cytidylate kinase, Cmk; Catalyzes the transfer of a phosphate group from ATP to either CMP or ump to form CDP or UDP and ADP [catalytic activity: ATP + CMP = ADP + CDP].
  
    0.412
MMAR_3428
Conserved hypothetical protein; Function unknown but contains zinc binding domain found at the N-terminus of the ClpX protein. ClpX is an ATPase which functions both as a substrate specificity component of the ClpXP protease and as a molecular chaperone.
  
     0.409
Your Current Organism:
Mycobacterium marinum
NCBI taxonomy Id: 216594
Other names: M. marinum M, Mycobacterium marinum M, Mycobacterium marinum str. M, Mycobacterium marinum strain M
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