STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMAR_2139Transcriptional regulatory protein; Involved in transcriptional mechanism. probably ArsR-family. (146 aa)    
Predicted Functional Partners:
MMAR_2140
Metal cation-transporting ATPase; possibly catalyzes the transport of undetermined metal cation with hydrolyse of ATP [catalytic activity: ATP + H(2)O + undetermined metal cation(in) = ADP + phosphate + undetermined metal cation (out)].
 
  
 0.806
MMAR_1653
Transcriptional regulatory protein; Involved in transcriptional mechanism.
  
   
 0.708
MMAR_4852
ArsR-family transcriptional regulator.
 
   
 0.682
MMAR_2138
Membrane-associated methyltransferase; Function unknown but contains a putative protein-S- isoprenylcysteine methyltransferase domain.
 
    0.623
arsC
Arsenic-transport integral membrane protein ArsC; Involved in transport of arsenic compounds across the membrane (export): arsenic resistance by an export mechanism. responsible for the translocation of the substrate across the membrane; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
  
 0.558
MMAR_2056
Transcriptional regulatory protein (probably ArsR-family); Involved in transcriptional mechanism.
  
   
 0.495
MMAR_2136
Conserved hypothetical metal transport protein.
 
   
 0.493
ctpD
Cation transporter p-type ATPase D CtpD; Cation-transporting ATPase; possibly catalyzes the transport of a cation (possibly cadmium) with the hydrolyse of ATP [catalytic activity: ATP + H(2)O + cation(in) = ADP + phosphate + cation(out)].
 
  
 0.421
zur
Zinc uptake regulation protein Zur; Acts as a global negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes; Belongs to the Fur family.
 
  
 0.413
MMAR_1270
Conserved hypothetical membrane protein.
 
   
 0.404
Your Current Organism:
Mycobacterium marinum
NCBI taxonomy Id: 216594
Other names: M. marinum M, Mycobacterium marinum M, Mycobacterium marinum str. M, Mycobacterium marinum strain M
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.