Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MMAR_2149Conserved hypothetical protein. (527 aa)    
Predicted Functional Partners:
MMAR_2150
Esterase (alpha-beta hydrolase superfamily); Contains patatin domain. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase; patatin-like phospholipase catalysing the cleavage of fatty acids from membrane lipids.
       0.799
MMAR_0246
Conserved hypothetical membrane protein.
  
     0.701
MMAR_2151
Conserved hypothetical membrane protein.
       0.544
MMAR_2747
Conserved hypothetical protein; Function unknown but contains nucleoside- diphosphate-sugar epimerase domain identity - a domain associated with cell envelope biogenesis, carbohydrate transport and metabolism.
 
  
 0.534
MMAR_4485
Conserved hypothetical secreted protein.
  
     0.472
MMAR_2422
Conserved hypothetical membrane protein.
  
     0.465
MMAR_2927
Conserved hypothetical protein; Function unknown; contains a putative glyoxalase domain.
 
     0.439
MMAR_0423
Conserved transmembrane protein.
 
   
 0.405
Your Current Organism:
Mycobacterium marinum
NCBI taxonomy Id: 216594
Other names: M. marinum M, Mycobacterium marinum M, Mycobacterium marinum str. M, Mycobacterium marinum strain M
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