STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMAR_2829Conserved protein. (273 aa)    
Predicted Functional Partners:
MMAR_0799
Transcriptional regulatory protein; Possibly involved in transcriptional mechanism.
 
 
 0.595
MMAR_3947
Transcriptional regulatory protein; Contains a DNA binding domain. possibly involved in transcriptional mechanism.
 
 
 0.540
MMAR_5320
Conserved hypothetical protein.
 
     0.506
MMAR_2152
Transcriptional regulator; Function unknown. contains Cdd pfam01381, HTH_3, helix-turn-helix of DNA binding proteins.
  
 
 0.482
MMAR_2830
Conserved hypothetical protein.
       0.480
MMAR_0042
Transcriptional regulatory protein; Maybe involved in transcriptional mechanism.
  
 
 0.471
MMAR_0790
Transcriptional regulatory protein; Possibly involved in transcriptional mechanism.
  
 
 0.471
MMAR_1378
Transcriptional regulatory protein; Involved in transcriptional mechanism.
  
 
 0.471
MMAR_1970
Transcriptional regulatory protein; Possibly involved in transcriptional mechanism.
  
 
 0.471
MMAR_2134
Transcriptional regulatory protein.
  
 
 0.471
Your Current Organism:
Mycobacterium marinum
NCBI taxonomy Id: 216594
Other names: M. marinum M, Mycobacterium marinum M, Mycobacterium marinum str. M, Mycobacterium marinum strain M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.