Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
esxREsaT-6 family EsxR; Belongs to the WXG100 family. (96 aa)    
Predicted Functional Partners:
esxG_1
EsaT-6 like protein EsxG_1; Belongs to the WXG100 family.
  
 
 0.974
esxG
EsaT-6 like protein EsxG.
  
 
 0.964
MMAR_0548
Conserved protein.
  
  
 0.727
esxB
Esat-6 like protein EsxB; Function unknown; a component of a novel secretion apparatus. (10 kDa culture filtrate antigen cfp10).
   
  
 0.642
MMAR_3003
PE family protein.
     
 0.638
esxB_1
A culture filtrate antigen that forms part of a novel secretion apparatus; Belongs to the WXG100 family.
   
  
 0.635
MMAR_3002
PPE family protein.
  
  
 0.631
atpB
ATP synthase a chain AtpB; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
      
 0.583
MMAR_0543
Conserved membrane protein.
   
 
 0.557
trmU
tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase TrmU; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
      
 0.514
Your Current Organism:
Mycobacterium marinum
NCBI taxonomy Id: 216594
Other names: M. marinum M, Mycobacterium marinum M, Mycobacterium marinum str. M, Mycobacterium marinum strain M
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