STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMAR_3106PPE family protein, PPE37. (479 aa)    
Predicted Functional Partners:
MMAR_0542
Conserved membrane protein.
  
  
 0.563
MMAR_0549
Conserved transmembrane protein.
  
  
 0.488
MMAR_0551
Conserved transmembrane protein.
  
  
 0.476
MMAR_0543
Conserved membrane protein.
  
  
 0.455
MMAR_0544
PE family protein, PE5.
     
 0.444
MMAR_3003
PE family protein.
     
 0.444
MMAR_0548
Conserved protein.
  
  
 0.429
mycP3
Membrane-anchored mycosin MycP3; Thought to have proteolytic activity.
  
  
 0.424
MMAR_5391
Conserved hypothetical protein.
   
  
 0.405
esxG
EsaT-6 like protein EsxG.
  
  
 0.403
Your Current Organism:
Mycobacterium marinum
NCBI taxonomy Id: 216594
Other names: M. marinum M, Mycobacterium marinum M, Mycobacterium marinum str. M, Mycobacterium marinum strain M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.