STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMAR_3205Conserved hypothetical protein; Function unknown but contains acyl-CoA N- acyltransferase superfamily domain. (212 aa)    
Predicted Functional Partners:
lppM
Conserved lipoprotein LppM.
       0.784
MMAR_1313
Conserved hypothetical protein.
  
     0.771
MMAR_1215
Conserved protein.
  
     0.765
MMAR_1345
Conserved alanine and valine rich protein.
 
     0.747
MMAR_3204
Conserved hypothetical membrane protein.
 
     0.740
MMAR_3223
Conserved hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
  
     0.732
MMAR_4555
Conserved hypothetical protein.
 
     0.732
MMAR_1112
Conserved protein; Hydrolase domain identity.
 
     0.731
MMAR_2224
Conserved hypothetical membrane protein.
 
  
 0.730
MMAR_3770
Conserved hypothetical membrane protein.
 
     0.730
Your Current Organism:
Mycobacterium marinum
NCBI taxonomy Id: 216594
Other names: M. marinum M, Mycobacterium marinum M, Mycobacterium marinum str. M, Mycobacterium marinum strain M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.