STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMAR_3209Conserved hypothetical membrane protein. (526 aa)    
Predicted Functional Partners:
MMAR_2264
Conserved integral membrane protein.
  
  
0.930
idsA2
Geranylgeranyl pyrophosphate synthetase IdsA2; Involved in lipid biosynthesis; Belongs to the FPP/GGPP synthase family.
   
 
 0.875
MMAR_0667
Glycosyl hydrolase.
  
     0.702
MMAR_0902
Conserved hypothetical membrane protein.
  
     0.673
MMAR_5369
Conserved transmembrane protein.
 
  
 0.673
MMAR_5400
Conserved protein.
  
     0.642
MMAR_2436
Conserved hypothetical protein.
  
     0.632
MMAR_3225
Conserved hypothetical integral membrane protein.
 
  
 0.624
MMAR_3230
Conserved hypothetical protein.
  
     0.623
MMAR_2261
Unidentified antibiotic-transport integral membrane ABC transporter; Thought to be involved in active transport of antibiotic across the membrane (export): unidentified antibiotic resistance by an export mechanism. responsible for the translocation of the substrate across the membrane.
 
   
 0.614
Your Current Organism:
Mycobacterium marinum
NCBI taxonomy Id: 216594
Other names: M. marinum M, Mycobacterium marinum M, Mycobacterium marinum str. M, Mycobacterium marinum strain M
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