STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhmAHaloalkane dehalogenase; Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. (297 aa)    
Predicted Functional Partners:
tadA
Cytidine/deoxycytidylate deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
      0.822
MMAR_4110
This family of dehydrogenases act on aldehyde substrates. members use NADP as a cofactor; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.708
adhE
Zinc-type alcohol dehydrogenase (E subunit) AdhE; Dehydrogeneses a alcohol (oxido-reduction) [catalytic activity: an alcohol + NAD+ = an aldehyde or ketone + NADH].
   
 0.691
adhB
Zinc-containing alcohol dehydrogenase NAD- dependent AdhB; Thought to catalyze the reversible oxidation of ethanol to acetaldehyde with the concomitant reduction of NAD. probably acts on primary or secondary alcohols or hemiacetals [catalytic activity: an alcohol + NAD+ = an aldehyde or ketone + NADH].
   
 0.691
adhA
Alcohol dehydrogenase AdhA; Catalyzes the reversible oxidation of ethanol to acetaldehyde with the concomitant reduction of NAD.
    
  0.686
adhC
NADP-dependent alcohol dehydrogenase AdhC; Generates aldehyde or ketone from alcohol [catalytic activity: alcohol + NADP(+) = aldehyde or ketone + NADPH].
    
  0.686
adhX
Zn-dependent alcohol dehydrogenase, AdhX.
    
  0.686
MMAR_3163
Zn-dependent alcohol dehydrogenase.
   
 
 0.671
MMAR_1180
N-term fused in-frame with fatty acyl-AMP ligase FadD28_1; Synthesis of unknown polyketide.
  
 
 0.574
MMAR_3099
Polyketide synthase and peptide synthetase; Production of unknown metabolite. this CDS encodes a single NRP and PKS module with domain structure: (KS, Ata, DH, ER, KR, ACP).
  
 
 0.574
Your Current Organism:
Mycobacterium marinum
NCBI taxonomy Id: 216594
Other names: M. marinum M, Mycobacterium marinum M, Mycobacterium marinum str. M, Mycobacterium marinum strain M
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