Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMAR_4366Conserved protein. (215 aa)    
Predicted Functional Partners:
MMAR_4365
Conserved protein.
       0.817
MMAR_2412
Conserved hypothetical membrane protein.
  
     0.766
MMAR_5354
Conserved hypothetical transmembrane protein.
  
     0.753
MMAR_0679
Conserved hypothetical protein.
  
     0.751
MMAR_5156
Conserved hypothetical protease; Function unknown, domain identity suggests peptidase, trypsin-like serine or cysteine protease. contains peptidase S1B, active site.
  
     0.751
MMAR_1980
Conserved membrane protein.
  
     0.750
MMAR_2043
Conserved transmembrane protein.
  
     0.737
MMAR_5366
Conserved secreted protein.
  
     0.737
MMAR_2283
Conserved membrane protein.
  
     0.727
MMAR_4518
Conserved hypothetical transmembrane protein.
  
     0.719
Your Current Organism:
Mycobacterium marinum
NCBI taxonomy Id: 216594
Other names: M. marinum M, Mycobacterium marinum M, Mycobacterium marinum str. M, Mycobacterium marinum strain M
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.