STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMAR_4398PE-PGRS family protein, PE_PGRS9_3. (910 aa)    
Predicted Functional Partners:
eccE5
Conserved membrane protein; Part of the ESX-5 specialized secretion system, which is responsible for the secretion of EsxN and a number of PE_PGRS and PPE proteins.
  
 
 
 0.814
MMAR_3066
Conserved hypothetical protein.
 
  
 0.793
MMAR_1402
PPE family protein.
  
   
 0.777
MMAR_0932
PPE family protein.
 
     0.775
MMAR_1139
PPE family protein.
  
   
 0.775
MMAR_4319
PPE family protein.
  
   
 0.775
MMAR_0642
PPE family protein.
  
     0.774
MMAR_1639
PPE family protein.
  
     0.774
MMAR_4621
PPE family protein.
  
     0.774
MMAR_0641
PPE family protein.
  
     0.773
Your Current Organism:
Mycobacterium marinum
NCBI taxonomy Id: 216594
Other names: M. marinum M, Mycobacterium marinum M, Mycobacterium marinum str. M, Mycobacterium marinum strain M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.