STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadE13acyl-CoA dehydrogenase FadE13; Function unknown, but involved in lipid degradation. (382 aa)    
Predicted Functional Partners:
MMAR_4531
Conserved hypothetical protein.
 
  
 0.975
echA7
enoyl-CoA hydratase EchA7; Oxidizes fatty acids using specific components [catalytic activity: (3S)-3-hydroxyacyl-CoA = TRANS-2(or 3)-enoyl-CoA + H(2)O].
  
 0.974
accD2
acetyl-/propionyl-CoA carboxylase (beta subunit) AccD2; Involved in fatty acid metabolism.
 
  
 0.972
accA2
Acetyl-/propionyl-coenzyme A carboxylase alpha chain, AccA2; This protein carries two functions: biotin carboxyl carrier protein and biotin carboxyltransferase. involved in the first step of long-chain fatty acid synthesis [catalytic activity: ATP + biotin-carboxyl-carrier protein + CO(2) = ADP + phosphate + carboxybiotin-carboxyl-carrier protein].
  
 
 0.969
fadE12
acyl-CoA dehydrogenase FadE12; Function unknown, but involved in lipid metabolism.
 
  
0.964
accD1
acetyl-/propionyl-CoA carboxylase (beta subunit) AccD1; Involved in fatty acid metabolism.
  
 
 0.923
fadE7
acyl-CoA dehydrogenase FadE7; Function unknown, but involved in lipid degradation.
  
  
 
0.917
fadB
Fatty oxidation protein FadB; Involved in fatty acid degradation (probably in fatty acid beta-oxidation cycle).
 
 0.916
fixB
The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. it transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase).
 
 0.834
echA9
enoyl-CoA hydratase EchA9; Oxidizes fatty acids using specific components (by similarity) [catalytic activity: (3S)-3-hydroxyacyl-CoA = TRANS-2(or 3)-enoyl-CoA + H(2)O].
  
 0.827
Your Current Organism:
Mycobacterium marinum
NCBI taxonomy Id: 216594
Other names: M. marinum M, Mycobacterium marinum M, Mycobacterium marinum str. M, Mycobacterium marinum strain M
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