STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMAR_4635Conserved exported or membrane protein. (212 aa)    
Predicted Functional Partners:
ompA
Outer membrane protein a OmpA; The protein behaved as a porin of low specific activity. structural protein that may protect the integrity of the bacterium.
 
   
 0.957
MMAR_4636
Conserved hypothetical membrane protein.
       0.784
MMAR_4638
Conserved protein.
       0.611
MMAR_1930
Conserved protein.
  
     0.609
MMAR_4351
Conserved hypothetical alanine and proline rich protein.
 
     0.606
MMAR_1136
Conserved hypothetical protein.
      
 0.597
MMAR_4639
Oxidoreductase; Function unknown, probably involved in cellular metabolism.
 
     0.589
MMAR_5452
Conserved hypothetical transmembrane protein.
  
     0.585
MMAR_0942
Transcriptional regulator; ArsR family.
  
     0.580
MMAR_5458
Conserved hypothetical membrane protein.
  
     0.569
Your Current Organism:
Mycobacterium marinum
NCBI taxonomy Id: 216594
Other names: M. marinum M, Mycobacterium marinum M, Mycobacterium marinum str. M, Mycobacterium marinum strain M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.