Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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[Homology]
Score
MMAR_4841Conserved hypothetical protein; May be an ADP-ribose pyrophosphatase - involved DNA replication, recombination, and repair; Belongs to the Nudix hydrolase family. (142 aa)    
Predicted Functional Partners:
MMAR_4842
Regulatory protein; Involved in unknown transcriptional regulatory network.
 
  
 0.717
MMAR_4843
Conserved hypothetical protein.
 
     0.550
MMAR_4503
Conserved hypothetical membrane protein; Function unknown, possibly involved in lipopolysaccharide synthesis.
  
  
 0.438
Your Current Organism:
Mycobacterium marinum
NCBI taxonomy Id: 216594
Other names: M. marinum M, Mycobacterium marinum M, Mycobacterium marinum str. M, Mycobacterium marinum strain M
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