STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
echA8_3enoyl-CoA dehydratase, EchA8_3; Oxidizes fatty acids using specific components [catalytic activity: (3S)-3-hydroxyacyl-CoA = TRANS-2(or 3)-enoyl-CoA + H(2)O]. (268 aa)    
Predicted Functional Partners:
echA19
enoyl-CoA hydratase EchA19; Oxidizes fatty acids using specific components [catalytic activity: (3S)-3-hydroxyacyl-CoA = TRANS-2(or 3)-enoyl-CoA + H(2)O].
  
     0.769
MMAR_4790
enoyl-CoA hydratase; Lipid metabolism.
  
     0.764
echA13_1
enoyl-CoA hydratase EchA13_1; Could possibly oxidizes fatty acids using specific components (by similarity) [catalytic activity: (3S)-3- hydroxyacyl-CoA = TRANS-2(or 3)-enoyl-CoA + H(2)O].
  
     0.755
echA13
enoyl-CoA hydratase EchA13; May oxidize fatty acids using specific components (by similarity) [catalytic activity: (3S)-3-hydroxyacyl- CoA = TRANS-2(or 3)-enoyl-CoA + H(2)O].
  
     0.752
fas
Involved in lipid metabolism. fatty acid synthase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH.
  
 0.751
MMAR_4953
PE-PGRS family protein.
  
  
 0.744
fadB2
3-hydroxybutyryl-CoA dehydrogenase FadB2; Butyrate/butanol-producing pathway [catalytic activity: (S)-3-hydroxybutanoyl-CoA + NADP+ = 3- acetoacetyl-CoA + NADPH].
 
 0.724
echA4_2
enoyl-CoA hydratase, EchA4_2; Oxidizes fatty acids using specific components [catalytic activity: (3S)-3-hydroxyacyl-CoA = TRANS-2(or 3)-enoyl-CoA + H(2)O]; Belongs to the enoyl-CoA hydratase/isomerase family.
  
     0.716
ltp4
Lipid transfer protein or keto acyl-CoA thiolase Ltp4; Function unknown, probably involved in lipid metabolism.
  
 0.681
MMAR_4731
3-ketoacyl-CoA thiolase; Function unknown, supposed involvement in lipid metabolism. may have specificity for branched-chain acyl CoAs.
  
 0.676
Your Current Organism:
Mycobacterium marinum
NCBI taxonomy Id: 216594
Other names: M. marinum M, Mycobacterium marinum M, Mycobacterium marinum str. M, Mycobacterium marinum strain M
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