STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMAR_5004Conserved hypothetical protein. (236 aa)    
Predicted Functional Partners:
cyp142A3
Cytochrome P450 are a group of heme-thiolate monooxygenases. they oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics.
     
 0.796
MMAR_4510
Conserved hypothetical protein.
  
     0.692
MMAR_5006
Conserved hypothetical protein; Function unknown, contains a C-term predicted nucleic-acid-binding domain.
 
   
 0.619
MMAR_4411
Conserved hypothetical protein.
  
     0.571
ltp3
Lipid carrier protein or keto acyl-CoA thiolase Ltp3; Function unknown, probably involved in lipid metabolism.
 
   
 0.565
fadE22
acyl-CoA dehydrogenase FadE22; Function unknown, but involved in lipid metabolism.
  
   
 0.547
MMAR_5005
Coenzyme F420-dependent oxidoreductase; Function unknown, probably involved in cellular metabolism.
     
 0.521
MMAR_2618
Amidohydrolase; Function unknown role in cellular metabolism.
 
     0.516
MMAR_4686
Conserved hypothetical membrane protein.
  
     0.509
fadE6
acyl-CoA dehydrogenase FadE6; Function unknown, but involved in lipid degradation.
  
   
 0.492
Your Current Organism:
Mycobacterium marinum
NCBI taxonomy Id: 216594
Other names: M. marinum M, Mycobacterium marinum M, Mycobacterium marinum str. M, Mycobacterium marinum strain M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.