Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
MMAR_5145Conserved hypothetical alanine-rich membrane protein. (200 aa)    
Predicted Functional Partners:
MMAR_5147
Conserved hypothetical protein; Function unknown, contains domain identity with Flp pilus assembly protein, ATPase CpaF.
  
 
 0.994
MMAR_5146
Conserved hypothetical membrane protein; Function unknown, contains domain identity to Flp pilus assembly protein TadB.
 
 
  0.990
MMAR_5148
Conserved hypothetical protein; Function unknown, has a P-loop containing nucleoside triphosphate hydrolase superfamily domain.
 
  
 0.972
MMAR_5144
Conserved hypothetical membrane protein.
 
   
 0.926
MMAR_4524
Conserved hypothetical membrane protein.
 
  
 0.828
MMAR_5577
Conserved hypothetical protein.
  
  
 0.824
rsbU
Regulator of sigma subunit, anti-anti-sigma factor RsbU; May be involved in regulation of SigG.
  
    0.761
MMAR_0738
Two-component sensor and regulator.
   
  
 0.685
MMAR_5143
Conserved hypothetical membrane protein.
     
 0.672
sseC2
Sulphur metabolism protein, SseC2.
  
     0.646
Your Current Organism:
Mycobacterium marinum
NCBI taxonomy Id: 216594
Other names: M. marinum M, Mycobacterium marinum M, Mycobacterium marinum str. M, Mycobacterium marinum strain M
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