Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHY57748.1DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (351 aa)    
Predicted Functional Partners:
AHY57747.1
DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.959
AHY57749.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.929
emrB
Multidrug resistance protein B; Multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.
 
 
 0.876
AHY59665.1
Multidrug RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.764
macB
Macrolide transporter; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
  
 0.742
AHY57789.1
Membrane protein; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.
  
 
 0.737
AHY58763.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.704
AHY61016.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.672
AHY59744.1
Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.666
AHY59397.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.656
Your Current Organism:
Stenotrophomonas rhizophila
NCBI taxonomy Id: 216778
Other names: ATCC BAA-473, CCUG 47042, DSM 14405, JCM 13333, S. rhizophila, Stenotrophomonas rhizophila Wolf et al. 2002, strain e-p10
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