Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AHY57569.1 | AHY58130.1 | DX03_02465 | DX03_05380 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.495 |
AHY57569.1 | rpoA | DX03_02465 | DX03_15960 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.433 |
AHY58129.1 | AHY58130.1 | DX03_05375 | DX03_05380 | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.509 |
AHY58130.1 | AHY57569.1 | DX03_05380 | DX03_02465 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.495 |
AHY58130.1 | AHY58129.1 | DX03_05380 | DX03_05375 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.509 |
AHY58130.1 | AHY58131.1 | DX03_05380 | DX03_05385 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.561 |
AHY58130.1 | AHY58628.1 | DX03_05380 | DX03_08025 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.411 |
AHY58130.1 | rpoA | DX03_05380 | DX03_15960 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.433 |
AHY58131.1 | AHY58130.1 | DX03_05385 | DX03_05380 | Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.561 |
AHY58628.1 | AHY58130.1 | DX03_08025 | DX03_05380 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.411 |
AHY58628.1 | rpoA | DX03_08025 | DX03_15960 | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.433 |
rpoA | AHY57569.1 | DX03_15960 | DX03_02465 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.433 |
rpoA | AHY58130.1 | DX03_15960 | DX03_05380 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.433 |
rpoA | AHY58628.1 | DX03_15960 | DX03_08025 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.433 |