Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ88362.1 | SHJ88452.1 | SAMN05444371_0037 | SAMN05444371_0043 | Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | L-proline dehydrogenase. | 0.939 |
SHJ88362.1 | SHJ89233.1 | SAMN05444371_0037 | SAMN05444371_0101 | Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Aspartate aminotransferase. | 0.921 |
SHJ88362.1 | SHJ95432.1 | SAMN05444371_0037 | SAMN05444371_0434 | Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | 0.928 |
SHJ88362.1 | SHK08079.1 | SAMN05444371_0037 | SAMN05444371_1133 | Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Ornithine--oxo-acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.971 |
SHJ88362.1 | SHK27476.1 | SAMN05444371_0037 | SAMN05444371_1686 | Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.919 |
SHJ88362.1 | SHK30246.1 | SAMN05444371_0037 | SAMN05444371_1813 | Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | 0.915 |
SHJ88362.1 | SHK41562.1 | SAMN05444371_0037 | SAMN05444371_2340 | Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Aspartate aminotransferase. | 0.921 |
SHJ88362.1 | SHK61176.1 | SAMN05444371_0037 | SAMN05444371_2977 | Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Glycine dehydrogenase; Belongs to the GcvP family. | 0.924 |
SHJ88362.1 | SHK63969.1 | SAMN05444371_0037 | SAMN05444371_3113 | Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Aspartate aminotransferase. | 0.921 |
SHJ88362.1 | gcvT | SAMN05444371_0037 | SAMN05444371_0368 | Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine. | 0.918 |
SHJ88452.1 | SHJ88362.1 | SAMN05444371_0043 | SAMN05444371_0037 | L-proline dehydrogenase. | Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.939 |
SHJ88452.1 | SHJ95432.1 | SAMN05444371_0043 | SAMN05444371_0434 | L-proline dehydrogenase. | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | 0.481 |
SHJ88452.1 | SHK27476.1 | SAMN05444371_0043 | SAMN05444371_1686 | L-proline dehydrogenase. | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.559 |
SHJ88452.1 | SHK30246.1 | SAMN05444371_0043 | SAMN05444371_1813 | L-proline dehydrogenase. | Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | 0.427 |
SHJ88452.1 | SHK61176.1 | SAMN05444371_0043 | SAMN05444371_2977 | L-proline dehydrogenase. | Glycine dehydrogenase; Belongs to the GcvP family. | 0.741 |
SHJ88452.1 | gcvT | SAMN05444371_0043 | SAMN05444371_0368 | L-proline dehydrogenase. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine. | 0.491 |
SHJ89233.1 | SHJ88362.1 | SAMN05444371_0101 | SAMN05444371_0037 | Aspartate aminotransferase. | Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.921 |
SHJ89233.1 | SHK27476.1 | SAMN05444371_0101 | SAMN05444371_1686 | Aspartate aminotransferase. | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.914 |
SHJ89233.1 | SHK30246.1 | SAMN05444371_0101 | SAMN05444371_1813 | Aspartate aminotransferase. | Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | 0.910 |
SHJ89233.1 | SHK41562.1 | SAMN05444371_0101 | SAMN05444371_2340 | Aspartate aminotransferase. | Aspartate aminotransferase. | 0.923 |
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