STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ94082.1Signal transduction histidine kinase. (576 aa)    
Predicted Functional Partners:
SHK05017.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
    
 0.999
SHK09615.1
methylglutaconyl-CoA hydratase.
    
 0.999
SHK30380.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
    
 0.999
SHK62013.1
3-hydroxyacyl-CoA dehydrogenase.
    
 0.999
SHK63678.1
Signal transduction histidine kinase.
 
0.999
SHK63698.1
His Kinase A (phospho-acceptor) domain-containing protein.
0.999
SHK54844.1
Signal transduction histidine kinase.
 
0.994
SHK62672.1
Bacteriophytochrome (light-regulated signal transduction histidine kinase).
 
 
0.961
SHK63665.1
Response regulator receiver domain-containing protein.
 0.959
SHK45126.1
Response regulator receiver domain-containing protein.
 
 0.952
Your Current Organism:
Chryseobacterium molle
NCBI taxonomy Id: 216903
Other names: C. molle, CCUG 52547, Chryseobacterium molle Herzog et al. 2008, Chryseobacterium sp. DW3, DSM 18016, strain DW3
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