STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ99821.1Por secretion system C-terminal sorting domain-containing protein. (486 aa)    
Predicted Functional Partners:
SHK00864.1
Protein involved in gliding motility GldF.
  
 
 0.795
SHK52648.1
ABC-2 family transporter protein.
  
 
 0.795
SHK34400.1
Por secretion system C-terminal sorting domain-containing protein.
 
 
  0.756
SHK00830.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.745
SHK00814.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.744
SHK02977.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.733
SHK00342.1
Tetratricopeptide repeat-containing protein.
  
     0.710
SHK41600.1
Regulator of nucleoside diphosphate kinase.
  
     0.699
SHK53548.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.699
SHK03026.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.698
Your Current Organism:
Chryseobacterium molle
NCBI taxonomy Id: 216903
Other names: C. molle, CCUG 52547, Chryseobacterium molle Herzog et al. 2008, Chryseobacterium sp. DW3, DSM 18016, strain DW3
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