Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ88128.1 | SHJ89153.1 | SAMN05444371_0023 | SAMN05444371_0095 | Hypothetical protein. | PD-(D/E)XK nuclease superfamily protein. | 0.651 |
SHJ88128.1 | SHJ99200.1 | SAMN05444371_0023 | SAMN05444371_0648 | Hypothetical protein. | Hypothetical protein. | 0.692 |
SHJ88128.1 | SHK01371.1 | SAMN05444371_0023 | SAMN05444371_0780 | Hypothetical protein. | ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains). | 0.651 |
SHJ88128.1 | SHK04659.1 | SAMN05444371_0023 | SAMN05444371_0949 | Hypothetical protein. | Hypothetical protein. | 0.500 |
SHJ88128.1 | SHK29248.1 | SAMN05444371_0023 | SAMN05444371_1764 | Hypothetical protein. | ABC-type branched-chain amino acid transport system, substrate-binding protein. | 0.726 |
SHJ88128.1 | SHK36673.1 | SAMN05444371_0023 | SAMN05444371_2105 | Hypothetical protein. | Protein of unknown function. | 0.454 |
SHJ88128.1 | SHK37391.1 | SAMN05444371_0023 | SAMN05444371_2140 | Hypothetical protein. | Smr domain-containing protein. | 0.574 |
SHJ89153.1 | SHJ88128.1 | SAMN05444371_0095 | SAMN05444371_0023 | PD-(D/E)XK nuclease superfamily protein. | Hypothetical protein. | 0.651 |
SHJ89153.1 | SHK01371.1 | SAMN05444371_0095 | SAMN05444371_0780 | PD-(D/E)XK nuclease superfamily protein. | ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains). | 0.990 |
SHJ89153.1 | SHK15184.1 | SAMN05444371_0095 | SAMN05444371_1512 | PD-(D/E)XK nuclease superfamily protein. | Outer membrane protein beta-barrel domain-containing protein. | 0.489 |
SHJ89153.1 | SHK29248.1 | SAMN05444371_0095 | SAMN05444371_1764 | PD-(D/E)XK nuclease superfamily protein. | ABC-type branched-chain amino acid transport system, substrate-binding protein. | 0.698 |
SHJ89153.1 | SHK36673.1 | SAMN05444371_0095 | SAMN05444371_2105 | PD-(D/E)XK nuclease superfamily protein. | Protein of unknown function. | 0.745 |
SHJ89153.1 | SHK37391.1 | SAMN05444371_0095 | SAMN05444371_2140 | PD-(D/E)XK nuclease superfamily protein. | Smr domain-containing protein. | 0.620 |
SHJ99200.1 | SHJ88128.1 | SAMN05444371_0648 | SAMN05444371_0023 | Hypothetical protein. | Hypothetical protein. | 0.692 |
SHJ99200.1 | SHK01371.1 | SAMN05444371_0648 | SAMN05444371_0780 | Hypothetical protein. | ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains). | 0.585 |
SHJ99200.1 | SHK37391.1 | SAMN05444371_0648 | SAMN05444371_2140 | Hypothetical protein. | Smr domain-containing protein. | 0.721 |
SHK01371.1 | SHJ88128.1 | SAMN05444371_0780 | SAMN05444371_0023 | ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains). | Hypothetical protein. | 0.651 |
SHK01371.1 | SHJ89153.1 | SAMN05444371_0780 | SAMN05444371_0095 | ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains). | PD-(D/E)XK nuclease superfamily protein. | 0.990 |
SHK01371.1 | SHJ99200.1 | SAMN05444371_0780 | SAMN05444371_0648 | ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains). | Hypothetical protein. | 0.585 |
SHK01371.1 | SHK02928.1 | SAMN05444371_0780 | SAMN05444371_0861 | ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains). | DNA polymerase III, alpha subunit. | 0.618 |
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