Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ99383.1 | SHK27290.1 | SAMN05444371_0660 | SAMN05444371_1678 | Hypothetical protein. | Uncharacterized membrane protein. | 0.415 |
SHJ99383.1 | SHK32349.1 | SAMN05444371_0660 | SAMN05444371_1929 | Hypothetical protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.400 |
SHK27243.1 | SHK27265.1 | SAMN05444371_1676 | SAMN05444371_1677 | Hypothetical protein. | tRNA-(ms[2]io[6]A)-hydroxylase. | 0.544 |
SHK27243.1 | SHK27290.1 | SAMN05444371_1676 | SAMN05444371_1678 | Hypothetical protein. | Uncharacterized membrane protein. | 0.544 |
SHK27265.1 | SHK27243.1 | SAMN05444371_1677 | SAMN05444371_1676 | tRNA-(ms[2]io[6]A)-hydroxylase. | Hypothetical protein. | 0.544 |
SHK27265.1 | SHK27290.1 | SAMN05444371_1677 | SAMN05444371_1678 | tRNA-(ms[2]io[6]A)-hydroxylase. | Uncharacterized membrane protein. | 0.782 |
SHK27265.1 | SHK27319.1 | SAMN05444371_1677 | SAMN05444371_1679 | tRNA-(ms[2]io[6]A)-hydroxylase. | Tyrosine phenol-lyase. | 0.540 |
SHK27290.1 | SHJ99383.1 | SAMN05444371_1678 | SAMN05444371_0660 | Uncharacterized membrane protein. | Hypothetical protein. | 0.415 |
SHK27290.1 | SHK27243.1 | SAMN05444371_1678 | SAMN05444371_1676 | Uncharacterized membrane protein. | Hypothetical protein. | 0.544 |
SHK27290.1 | SHK27265.1 | SAMN05444371_1678 | SAMN05444371_1677 | Uncharacterized membrane protein. | tRNA-(ms[2]io[6]A)-hydroxylase. | 0.782 |
SHK27290.1 | SHK27319.1 | SAMN05444371_1678 | SAMN05444371_1679 | Uncharacterized membrane protein. | Tyrosine phenol-lyase. | 0.530 |
SHK27290.1 | SHK32349.1 | SAMN05444371_1678 | SAMN05444371_1929 | Uncharacterized membrane protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.410 |
SHK27290.1 | SHK34114.1 | SAMN05444371_1678 | SAMN05444371_2003 | Uncharacterized membrane protein. | Hyperosmotically inducible protein. | 0.425 |
SHK27319.1 | SHK27265.1 | SAMN05444371_1679 | SAMN05444371_1677 | Tyrosine phenol-lyase. | tRNA-(ms[2]io[6]A)-hydroxylase. | 0.540 |
SHK27319.1 | SHK27290.1 | SAMN05444371_1679 | SAMN05444371_1678 | Tyrosine phenol-lyase. | Uncharacterized membrane protein. | 0.530 |
SHK32349.1 | SHJ99383.1 | SAMN05444371_1929 | SAMN05444371_0660 | Outer membrane receptor proteins, mostly Fe transport. | Hypothetical protein. | 0.400 |
SHK32349.1 | SHK27290.1 | SAMN05444371_1929 | SAMN05444371_1678 | Outer membrane receptor proteins, mostly Fe transport. | Uncharacterized membrane protein. | 0.410 |
SHK32349.1 | SHK34114.1 | SAMN05444371_1929 | SAMN05444371_2003 | Outer membrane receptor proteins, mostly Fe transport. | Hyperosmotically inducible protein. | 0.611 |
SHK34114.1 | SHK27290.1 | SAMN05444371_2003 | SAMN05444371_1678 | Hyperosmotically inducible protein. | Uncharacterized membrane protein. | 0.425 |
SHK34114.1 | SHK32349.1 | SAMN05444371_2003 | SAMN05444371_1929 | Hyperosmotically inducible protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.611 |