STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK29180.1Por secretion system C-terminal sorting domain-containing protein. (459 aa)    
Predicted Functional Partners:
SHK29155.1
SusD family protein.
 
     0.863
SHK29138.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.854
SHK00814.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.739
SHK00830.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.728
SHK62885.1
Hypothetical protein.
  
     0.727
SHK42915.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.700
SHK29203.1
Putative porin.
       0.658
SHJ99821.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.649
SHK04329.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.518
SHK02661.1
AraC-type DNA-binding protein.
  
     0.484
Your Current Organism:
Chryseobacterium molle
NCBI taxonomy Id: 216903
Other names: C. molle, CCUG 52547, Chryseobacterium molle Herzog et al. 2008, Chryseobacterium sp. DW3, DSM 18016, strain DW3
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