Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ98314.1 | SHK30327.1 | SAMN05444371_0594 | SAMN05444371_1818 | NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | NUDIX domain-containing protein. | 0.910 |
SHJ98314.1 | SHK38586.1 | SAMN05444371_0594 | SAMN05444371_2192 | NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | 0.573 |
SHJ98314.1 | cobB | SAMN05444371_0594 | SAMN05444371_0495 | NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily. | 0.932 |
SHJ98314.1 | nadD | SAMN05444371_0594 | SAMN05444371_1832 | NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.968 |
SHJ98314.1 | pncB | SAMN05444371_0594 | SAMN05444371_2004 | NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.657 |
SHK07357.1 | SHK30327.1 | SAMN05444371_1097 | SAMN05444371_1818 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | NUDIX domain-containing protein. | 0.912 |
SHK07357.1 | SHK30363.1 | SAMN05444371_1097 | SAMN05444371_1820 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | dCMP deaminase. | 0.909 |
SHK07357.1 | SHK38586.1 | SAMN05444371_1097 | SAMN05444371_2192 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | 0.917 |
SHK07357.1 | pncB | SAMN05444371_1097 | SAMN05444371_2004 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.909 |
SHK07357.1 | surE | SAMN05444371_1097 | SAMN05444371_1442 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.915 |
SHK30327.1 | SHJ98314.1 | SAMN05444371_1818 | SAMN05444371_0594 | NUDIX domain-containing protein. | NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | 0.910 |
SHK30327.1 | SHK07357.1 | SAMN05444371_1818 | SAMN05444371_1097 | NUDIX domain-containing protein. | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.912 |
SHK30327.1 | SHK30363.1 | SAMN05444371_1818 | SAMN05444371_1820 | NUDIX domain-containing protein. | dCMP deaminase. | 0.676 |
SHK30327.1 | SHK30380.1 | SAMN05444371_1818 | SAMN05444371_1821 | NUDIX domain-containing protein. | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.650 |
SHK30327.1 | SHK38586.1 | SAMN05444371_1818 | SAMN05444371_2192 | NUDIX domain-containing protein. | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | 0.919 |
SHK30327.1 | cobB | SAMN05444371_1818 | SAMN05444371_0495 | NUDIX domain-containing protein. | NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily. | 0.916 |
SHK30327.1 | nadD | SAMN05444371_1818 | SAMN05444371_1832 | NUDIX domain-containing protein. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.909 |
SHK30327.1 | pncB | SAMN05444371_1818 | SAMN05444371_2004 | NUDIX domain-containing protein. | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.928 |
SHK30327.1 | surE | SAMN05444371_1818 | SAMN05444371_1442 | NUDIX domain-containing protein. | 5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.915 |
SHK30327.1 | xerC | SAMN05444371_1818 | SAMN05444371_1819 | NUDIX domain-containing protein. | Integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.758 |
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