STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK44547.1Hypothetical protein. (128 aa)    
Predicted Functional Partners:
SHK40439.1
Hypothetical protein.
  
     0.773
SHK36258.1
Hypothetical protein.
  
     0.771
SHK37513.1
Branched-chain amino acid aminotransferase.
  
     0.770
SHK37391.1
Smr domain-containing protein.
  
     0.768
SHJ94320.1
pRiA4b ORF-3-like protein.
  
     0.746
SHK50975.1
Protein of unknown function.
  
     0.742
SHK29203.1
Putative porin.
 
     0.739
SHJ98433.1
Cell division protein ZapA.
  
     0.736
SHJ90194.1
Mevalonate kinase.
  
     0.721
SHK26878.1
Hypothetical protein.
  
     0.719
Your Current Organism:
Chryseobacterium molle
NCBI taxonomy Id: 216903
Other names: C. molle, CCUG 52547, Chryseobacterium molle Herzog et al. 2008, Chryseobacterium sp. DW3, DSM 18016, strain DW3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.