STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK51326.1Uncharacterized membrane protein YckC, RDD family. (137 aa)    
Predicted Functional Partners:
SHK51295.1
Membrane protein YfhO.
       0.723
SHK51275.1
Hypothetical protein.
       0.444
SHK51250.1
Hypothetical protein.
       0.439
SHK38913.1
Heat shock protein Hsp15.
   
    0.414
Your Current Organism:
Chryseobacterium molle
NCBI taxonomy Id: 216903
Other names: C. molle, CCUG 52547, Chryseobacterium molle Herzog et al. 2008, Chryseobacterium sp. DW3, DSM 18016, strain DW3
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.