STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK54275.1Mannose-6-phosphate isomerase, type 2. (165 aa)    
Predicted Functional Partners:
SHK10685.1
Phosphomannomutase.
  
 
 0.917
fbp
Fructose-1,6-bisphosphatase I; Belongs to the FBPase class 1 family.
    
  0.917
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.916
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
    
  0.909
SHK54336.1
Glucosamine-6-phosphate deaminase.
 
  
  0.763
SHK54316.1
Glucokinase.
 
  
 0.691
SHK55102.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
    
  0.608
SHK54300.1
Alpha-1,2-mannosidase, putative.
       0.590
SHK15164.1
Transcriptional regulator, AraC family.
  
  0.493
SHK70218.1
AraC-type DNA-binding protein.
  
  0.493
Your Current Organism:
Chryseobacterium molle
NCBI taxonomy Id: 216903
Other names: C. molle, CCUG 52547, Chryseobacterium molle Herzog et al. 2008, Chryseobacterium sp. DW3, DSM 18016, strain DW3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.