STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK73583.1Hypothetical protein. (276 aa)    
Predicted Functional Partners:
SHK73607.1
Hypothetical protein; Partial gene; manually curated.
       0.777
SHK73539.1
Bacteroides conjugative transposon TraK protein.
       0.774
SHK73566.1
Hypothetical protein.
       0.774
SHK73521.1
Hypothetical protein.
       0.773
SHK73479.1
Bacteroides conjugative transposon TraN protein.
       0.663
SHK73499.1
Bacteroides conjugative transposon TraM protein.
       0.663
SHK73439.1
Type IV secretion-system coupling protein DNA-binding domain-containing protein.
       0.662
SHK73421.1
Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain.
       0.661
SHK73459.1
Hypothetical protein.
       0.661
SHK73399.1
Hypothetical protein.
       0.627
Your Current Organism:
Chryseobacterium molle
NCBI taxonomy Id: 216903
Other names: C. molle, CCUG 52547, Chryseobacterium molle Herzog et al. 2008, Chryseobacterium sp. DW3, DSM 18016, strain DW3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.