Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AOG61092.1 | AOG61093.1 | SHELI_v1c11450 | SHELI_v1c11460 | Hypothetical protein. | Hypothetical protein. | 0.508 |
AOG61092.1 | mreB-3 | SHELI_v1c11450 | SHELI_v1c11430 | Hypothetical protein. | Cell shape determining protein MreB. | 0.409 |
AOG61092.1 | mreB-4 | SHELI_v1c11450 | SHELI_v1c11440 | Hypothetical protein. | Cell shape determining protein MreB. | 0.601 |
AOG61093.1 | AOG61092.1 | SHELI_v1c11460 | SHELI_v1c11450 | Hypothetical protein. | Hypothetical protein. | 0.508 |
AOG61093.1 | mreB-4 | SHELI_v1c11460 | SHELI_v1c11440 | Hypothetical protein. | Cell shape determining protein MreB. | 0.407 |
ftsA | ftsZ | SHELI_v1c07180 | SHELI_v1c07170 | Cell division protein FtsA. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.998 |
ftsA | mreB-3 | SHELI_v1c07180 | SHELI_v1c11430 | Cell division protein FtsA. | Cell shape determining protein MreB. | 0.637 |
ftsA | mreB-4 | SHELI_v1c07180 | SHELI_v1c11440 | Cell division protein FtsA. | Cell shape determining protein MreB. | 0.495 |
ftsA | tufA | SHELI_v1c07180 | SHELI_v1c10830 | Cell division protein FtsA. | Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.469 |
ftsZ | ftsA | SHELI_v1c07170 | SHELI_v1c07180 | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | Cell division protein FtsA. | 0.998 |
ftsZ | mreB-3 | SHELI_v1c07170 | SHELI_v1c11430 | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | Cell shape determining protein MreB. | 0.726 |
ftsZ | mreB-4 | SHELI_v1c07170 | SHELI_v1c11440 | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | Cell shape determining protein MreB. | 0.618 |
ftsZ | tufA | SHELI_v1c07170 | SHELI_v1c10830 | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.448 |
ispE | ksgA | SHELI_v1c11400 | SHELI_v1c11410 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase. | 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.862 |
ispE | mreB-3 | SHELI_v1c11400 | SHELI_v1c11430 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase. | Cell shape determining protein MreB. | 0.583 |
ispE | mreB-4 | SHELI_v1c11400 | SHELI_v1c11440 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase. | Cell shape determining protein MreB. | 0.426 |
ispE | rnmV | SHELI_v1c11400 | SHELI_v1c11420 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase. | Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step. | 0.867 |
ksgA | ispE | SHELI_v1c11410 | SHELI_v1c11400 | 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase. | 0.862 |
ksgA | mreB-3 | SHELI_v1c11410 | SHELI_v1c11430 | 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | Cell shape determining protein MreB. | 0.610 |
ksgA | mreB-4 | SHELI_v1c11410 | SHELI_v1c11440 | 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | Cell shape determining protein MreB. | 0.463 |
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