Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKX34083.1 | AKX34309.1 | SLITO_v1c04300 | SLITO_v1c06820 | Hypothetical protein. | ATP-dependent helicase IRC3. | 0.716 |
AKX34083.1 | polA-2 | SLITO_v1c04300 | SLITO_v1c01620 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.446 |
AKX34306.1 | AKX34307.1 | SLITO_v1c06790 | SLITO_v1c06800 | Hypothetical protein. | Hypothetical protein. | 0.773 |
AKX34306.1 | AKX34309.1 | SLITO_v1c06790 | SLITO_v1c06820 | Hypothetical protein. | ATP-dependent helicase IRC3. | 0.608 |
AKX34306.1 | dcm | SLITO_v1c06790 | SLITO_v1c06810 | Hypothetical protein. | DNA-methyltransferase. | 0.773 |
AKX34307.1 | AKX34306.1 | SLITO_v1c06800 | SLITO_v1c06790 | Hypothetical protein. | Hypothetical protein. | 0.773 |
AKX34307.1 | AKX34309.1 | SLITO_v1c06800 | SLITO_v1c06820 | Hypothetical protein. | ATP-dependent helicase IRC3. | 0.682 |
AKX34307.1 | dcm | SLITO_v1c06800 | SLITO_v1c06810 | Hypothetical protein. | DNA-methyltransferase. | 0.857 |
AKX34309.1 | AKX34083.1 | SLITO_v1c06820 | SLITO_v1c04300 | ATP-dependent helicase IRC3. | Hypothetical protein. | 0.716 |
AKX34309.1 | AKX34306.1 | SLITO_v1c06820 | SLITO_v1c06790 | ATP-dependent helicase IRC3. | Hypothetical protein. | 0.608 |
AKX34309.1 | AKX34307.1 | SLITO_v1c06820 | SLITO_v1c06800 | ATP-dependent helicase IRC3. | Hypothetical protein. | 0.682 |
AKX34309.1 | dcm | SLITO_v1c06820 | SLITO_v1c06810 | ATP-dependent helicase IRC3. | DNA-methyltransferase. | 0.785 |
AKX34309.1 | hit | SLITO_v1c06820 | SLITO_v1c02170 | ATP-dependent helicase IRC3. | Histidine triad protein. | 0.690 |
AKX34309.1 | polA | SLITO_v1c06820 | SLITO_v1c00520 | ATP-dependent helicase IRC3. | DNA polymerase I. | 0.904 |
AKX34309.1 | polA-2 | SLITO_v1c06820 | SLITO_v1c01620 | ATP-dependent helicase IRC3. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.924 |
AKX34309.1 | rpoA | SLITO_v1c06820 | SLITO_v1c09760 | ATP-dependent helicase IRC3. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.965 |
AKX34309.1 | rpoB | SLITO_v1c06820 | SLITO_v1c00390 | ATP-dependent helicase IRC3. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.968 |
AKX34309.1 | rpoC | SLITO_v1c06820 | SLITO_v1c00400 | ATP-dependent helicase IRC3. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.840 |
dcm | AKX34306.1 | SLITO_v1c06810 | SLITO_v1c06790 | DNA-methyltransferase. | Hypothetical protein. | 0.773 |
dcm | AKX34307.1 | SLITO_v1c06810 | SLITO_v1c06800 | DNA-methyltransferase. | Hypothetical protein. | 0.857 |
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