Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALX70296.1 | ALX70298.1 | STURO_v1c00270 | STURO_v1c00290 | Hypothetical protein. | Hypothetical protein. | 0.770 |
ALX70296.1 | ALX70301.1 | STURO_v1c00270 | STURO_v1c00320 | Hypothetical protein. | Hypothetical protein. | 0.735 |
ALX70296.1 | cysS | STURO_v1c00270 | STURO_v1c00300 | Hypothetical protein. | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.882 |
ALX70296.1 | glyS | STURO_v1c00270 | STURO_v1c02800 | Hypothetical protein. | glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.464 |
ALX70296.1 | leuS | STURO_v1c00270 | STURO_v1c09740 | Hypothetical protein. | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.820 |
ALX70296.1 | rlmB | STURO_v1c00270 | STURO_v1c00310 | Hypothetical protein. | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.968 |
ALX70296.1 | serS | STURO_v1c00270 | STURO_v1c09050 | Hypothetical protein. | seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | 0.998 |
ALX70296.1 | ung | STURO_v1c00270 | STURO_v1c00280 | Hypothetical protein. | uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.845 |
ALX70296.1 | valS | STURO_v1c00270 | STURO_v1c04630 | Hypothetical protein. | valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | 0.691 |
ALX70298.1 | ALX70296.1 | STURO_v1c00290 | STURO_v1c00270 | Hypothetical protein. | Hypothetical protein. | 0.770 |
ALX70298.1 | ALX70301.1 | STURO_v1c00290 | STURO_v1c00320 | Hypothetical protein. | Hypothetical protein. | 0.752 |
ALX70298.1 | cysS | STURO_v1c00290 | STURO_v1c00300 | Hypothetical protein. | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.780 |
ALX70298.1 | rlmB | STURO_v1c00290 | STURO_v1c00310 | Hypothetical protein. | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.777 |
ALX70298.1 | ung | STURO_v1c00290 | STURO_v1c00280 | Hypothetical protein. | uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.775 |
ALX70301.1 | ALX70296.1 | STURO_v1c00320 | STURO_v1c00270 | Hypothetical protein. | Hypothetical protein. | 0.735 |
ALX70301.1 | ALX70298.1 | STURO_v1c00320 | STURO_v1c00290 | Hypothetical protein. | Hypothetical protein. | 0.752 |
ALX70301.1 | cysS | STURO_v1c00320 | STURO_v1c00300 | Hypothetical protein. | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.773 |
ALX70301.1 | rlmB | STURO_v1c00320 | STURO_v1c00310 | Hypothetical protein. | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.773 |
ALX70301.1 | ung | STURO_v1c00320 | STURO_v1c00280 | Hypothetical protein. | uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.741 |
ALX71197.1 | cysS | STURO_v1c09460 | STURO_v1c00300 | Uncharacterized protein associated with RNAses G and E. | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.724 |
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