STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OAK68004.1Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa)    
Predicted Functional Partners:
OAK67077.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.770
OAK72490.1
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.769
OAK75664.1
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.765
OAK69045.1
Spore gernimation protein GerD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.763
OAK67518.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.761
OAK67673.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.758
sspI
Small acid-soluble spore protein SspI; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SspI family.
  
    0.744
OAK67692.1
Spore protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.735
OAK72551.1
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
    
   0.721
OAK75335.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.720
Your Current Organism:
Bacillus galactosidilyticus
NCBI taxonomy Id: 217031
Other names: B. galactosidilyticus, Bacillus galactosidasius, Bacillus galactosidilyticus Heyndrickx et al. 2004, DSM 15595, LMG 17892, LMG:17892, strain Logan B2188, strain MB 800
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