STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APX77208.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)    
Predicted Functional Partners:
APX77669.1
DUF1289 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.630
APX73849.1
Thiol reductase thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.564
APX74515.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.562
APX74622.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.561
APX74174.1
NfeD-like family protein 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.555
APX74207.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.515
APX75226.1
Gamma-glutamylcyclotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.507
BUW96_20050
30S ribosomal protein S15; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.504
APX77010.1
Phasin (PHA-granule associated protein); Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.504
APX76688.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.497
Your Current Organism:
Achromobacter insolitus
NCBI taxonomy Id: 217204
Other names: A. insolitus, API 201-3-84, Achromobacter insolitus Coenye et al. 2003, Achromobacter sp. AR476-2, Achromobacter sp. KCJK1724, Achromobacter sp. KCJK1731, Achromobacter sp. LMG 6003, Achromobacter sp. UBA1170, Achromobacter sp. UBA1582, CCM 7182, CCUG 47057, LMG 6003, LMG:6003, NCTC 13520, strain Gilardi 3038
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