STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2506_06921Unannotated protein; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. (420 aa)    
Predicted Functional Partners:
FP2506_02979
Unannotated protein.
 0.998
FP2506_00630
Unannotated protein.
 
 0.995
FP2506_06931
Unannotated protein.
 
  
 0.986
FP2506_06926
Unannotated protein.
 
 
 0.985
FP2506_06946
Unannotated protein.
 
 
 0.980
FP2506_05936
Unannotated protein.
    
   0.938
FP2506_17604
Unannotated protein.
    
   0.938
FP2506_12959
Unannotated protein.
    
   0.938
FP2506_06916
Unannotated protein.
 
    0.931
FP2506_06951
Unannotated protein.
    
0.816
Your Current Organism:
Fulvimarina pelagi
NCBI taxonomy Id: 217511
Other names: ATCC BAA-666, DSM 15513, F. pelagi, Fulvimarina pelagi Cho and Giovannoni 2003 emend. Rathsack et al. 2011, KCTC 12091, strain HTCC2506
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.