STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glgCUnannotated protein; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (425 aa)    
Predicted Functional Partners:
glgA
Unannotated protein; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 
 0.999
FP2506_15849
Unannotated protein; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
 
 
 0.989
glgB
Unannotated protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 
 0.988
argG
Unannotated protein; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 
 0.974
FP2506_07341
Unannotated protein; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.966
FP2506_15819
Unannotated protein; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.965
FP2506_03750
Unannotated protein.
  
 
 0.953
FP2506_15834
Unannotated protein.
 
  
 0.953
argC
Unannotated protein; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
  
  
 0.923
argB
Unannotated protein; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
  
  
 0.914
Your Current Organism:
Fulvimarina pelagi
NCBI taxonomy Id: 217511
Other names: ATCC BAA-666, DSM 15513, F. pelagi, Fulvimarina pelagi Cho and Giovannoni 2003 emend. Rathsack et al. 2011, KCTC 12091, strain HTCC2506
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.