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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APH39832.1Dimethylamine corrinoid protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology. (203 aa)    
Predicted Functional Partners:
APH38184.1
[dimethylamine--corrinoid protein] Co-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.977
APH38401.1
methylcobamide--CoM methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.933
APH39780.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 
0.913
APH38970.1
[dimethylamine--corrinoid protein] Co-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.908
APH38965.1
[trimethylamine--corrinoid protein] Co-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.907
APH38967.1
Dimethylamine corrinoid protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.906
APH39897.1
Dimethylamine corrinoid protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.900
APH39549.1
Methanol--corrinoid methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.889
APH39547.1
Methanol--corrinoid methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.887
APH39553.1
methylcobamide--CoM methyltransferase; Catalyze the formation of methyl-coenzyme M from methylcobalamin and coenzyme M; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.767
Your Current Organism:
Methanohalophilus halophilus
NCBI taxonomy Id: 2177
Other names: DSM 3094, INMI Z-7982, Methanihalophilus halophilus, Methanococcus halophilus, OCM 160, Z-7982
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