STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSY_0689MazG nucleotide pyrophosphohydrolase domain protein. (117 aa)    
Predicted Functional Partners:
guaA
Nonstructural protein; Catalyzes the synthesis of GMP from XMP.
    
  0.797
BPSY_0690
Putative lysine decarboxylase; Belongs to the LOG family.
 
    0.657
cmk
Bifunctional cytidylate kinase/GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the cytidylate kinase family. Type 1 subfamily.
    
  0.511
BPSY_2014
Hypothetical protein.
  
     0.487
BPSY_0119
Anaerobic ribonucleoside triphosphate reductase.
    
  0.476
BPSY_2139
Hypothetical protein.
 
     0.433
BPSY_2051
Rhodanese domain protein.
  
     0.425
BPSY_2122
Membrane protein YdbS.
  
    0.402
Your Current Organism:
Bifidobacterium psychraerophilum
NCBI taxonomy Id: 218140
Other names: B. psychraerophilum, Bifidobacterium psychraerophilum Simpson et al. 2004, JCM 15958, LMG 21775, LMG:21775, NCIMB 13940, strain T16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.