Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BPSY_0827 | BPSY_0828 | BPSY_0827 | BPSY_0828 | Aspartate kinase; Belongs to the aspartokinase family. | Aspartate kinase. | 0.997 |
BPSY_0827 | BPSY_0916 | BPSY_0827 | BPSY_0916 | Aspartate kinase; Belongs to the aspartokinase family. | Homoserine dehydrogenase. | 0.947 |
BPSY_0827 | BPSY_1207 | BPSY_0827 | BPSY_1207 | Aspartate kinase; Belongs to the aspartokinase family. | Cystathionine beta-synthase. | 0.749 |
BPSY_0827 | BPSY_1768 | BPSY_0827 | BPSY_1768 | Aspartate kinase; Belongs to the aspartokinase family. | Succinate dehydrogenase flavoprotein subunit. | 0.689 |
BPSY_0827 | BPSY_1772 | BPSY_0827 | BPSY_1772 | Aspartate kinase; Belongs to the aspartokinase family. | Aspartate aminotransferase. | 0.752 |
BPSY_0827 | argG | BPSY_0827 | BPSY_1396 | Aspartate kinase; Belongs to the aspartokinase family. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.917 |
BPSY_0827 | asd | BPSY_0827 | BPSY_0829 | Aspartate kinase; Belongs to the aspartokinase family. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.996 |
BPSY_0827 | purA | BPSY_0827 | BPSY_0693 | Aspartate kinase; Belongs to the aspartokinase family. | Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.914 |
BPSY_0827 | pyrB | BPSY_0827 | BPSY_1620 | Aspartate kinase; Belongs to the aspartokinase family. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.903 |
BPSY_0827 | thrB | BPSY_0827 | BPSY_0917 | Aspartate kinase; Belongs to the aspartokinase family. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.728 |
BPSY_0828 | BPSY_0827 | BPSY_0828 | BPSY_0827 | Aspartate kinase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.997 |
BPSY_0828 | BPSY_0916 | BPSY_0828 | BPSY_0916 | Aspartate kinase. | Homoserine dehydrogenase. | 0.937 |
BPSY_0828 | BPSY_1207 | BPSY_0828 | BPSY_1207 | Aspartate kinase. | Cystathionine beta-synthase. | 0.749 |
BPSY_0828 | BPSY_1768 | BPSY_0828 | BPSY_1768 | Aspartate kinase. | Succinate dehydrogenase flavoprotein subunit. | 0.689 |
BPSY_0828 | BPSY_1772 | BPSY_0828 | BPSY_1772 | Aspartate kinase. | Aspartate aminotransferase. | 0.752 |
BPSY_0828 | argG | BPSY_0828 | BPSY_1396 | Aspartate kinase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.726 |
BPSY_0828 | asd | BPSY_0828 | BPSY_0829 | Aspartate kinase. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.988 |
BPSY_0828 | purA | BPSY_0828 | BPSY_0693 | Aspartate kinase. | Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.718 |
BPSY_0828 | pyrB | BPSY_0828 | BPSY_1620 | Aspartate kinase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.731 |
BPSY_0828 | thrB | BPSY_0828 | BPSY_0917 | Aspartate kinase. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.728 |
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