Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KPL61649.1LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)    
Predicted Functional Partners:
KPL61515.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
KPL60549.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.996
KPL60709.1
Cell wall-active antibiotics response protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.921
KPL61598.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.909
KPL57989.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.908
KPL60548.1
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.903
KPL60194.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.883
KPL59303.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.848
KPL60359.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.765
KPL61516.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.727
Your Current Organism:
Bacillus vietnamensis
NCBI taxonomy Id: 218284
Other names: B. vietnamensis, Bacillus vietnamensis Noguchi et al. 2004, JCM 11124, NBRC 101237, NRIC 0531, NRRL B-23890, strain 15-1
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