Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KPL61588.1Catalyzes the formation of acetoacetate from 3-hydroxybutyrate; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)    
Predicted Functional Partners:
KPL59881.1
hydroxymethylglutaryl-CoA lyase; Catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.912
KPL59702.1
succinyl-CoA:3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.909
KPL59863.1
CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.909
KPL59701.1
succinyl-CoA:3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.905
KPL59862.1
CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.905
KPL59118.1
Catalyzes the formation of acetoacetate from 3-hydroxybutyrate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.901
KPL61587.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.796
KPL58817.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.552
KPL61655.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.492
KPL61535.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.445
Your Current Organism:
Bacillus vietnamensis
NCBI taxonomy Id: 218284
Other names: B. vietnamensis, Bacillus vietnamensis Noguchi et al. 2004, JCM 11124, NBRC 101237, NRIC 0531, NRRL B-23890, strain 15-1
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