Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KPL59690.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)    
Predicted Functional Partners:
KPL59879.1
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.909
KPL58849.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.671
KPL59691.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.627
KPL59692.1
Sugar dehydrogenase; Converts glucose to D-glucono-1,5 lactone; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  
0.553
KPL57650.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
   0.541
KPL60322.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.526
KPL58565.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.485
KPL61353.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.479
Your Current Organism:
Bacillus vietnamensis
NCBI taxonomy Id: 218284
Other names: B. vietnamensis, Bacillus vietnamensis Noguchi et al. 2004, JCM 11124, NBRC 101237, NRIC 0531, NRRL B-23890, strain 15-1
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