ECA0239 protein (Pectobacterium atrosepticum)

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Score

ECA0239

Similar to Yersinia pestis putative exported protein ypo3730 SWALL:Q8ZAR1 (EMBL:AJ414158) (233 aa) fasta scores: E(): 7.2e-42, 50.87% id in 230 aa, and to Salmonella typhi hypothetical protein sty3714 SWALL:Q8Z330 (EMBL:AL627279) (230 aa) fasta scores: E(): 3.3e-30, 38.69% id in 230 aa. (228 aa)

Predicted Functional Partners:

hupA

0.804

nfi

0.482

parC

0.415

Your Current Organism:

Pectobacterium atrosepticum

NCBI taxonomy Id: 218491
Other names: Erwinia carotovora subsp. atroseptica SCRI1043, Erwinia carotovora subsp. atroseptica str. SCRI1043, P. atrosepticum SCRI1043, Pectobacterium atrosepticum SCRI1043, Pectobacterium atrosepticum str. SCRI1043, Pectobacterium atrosepticum strain SCRI1043, Pectobacterium carotovora subsp. atroseptica SCRI1043, Pectobacterium carotovora subsp. atroseptica str. SCRI1043

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ECA0239	hupA	ECA0239	ECA0238	Similar to Yersinia pestis putative exported protein ypo3730 SWALL:Q8ZAR1 (EMBL:AJ414158) (233 aa) fasta scores: E(): 7.2e-42, 50.87% id in 230 aa, and to Salmonella typhi hypothetical protein sty3714 SWALL:Q8Z330 (EMBL:AL627279) (230 aa) fasta scores: E(): 3.3e-30, 38.69% id in 230 aa.	DNA-binding protein HU-alpha; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.	0.804
ECA0239	nfi	ECA0239	ECA0237	Similar to Yersinia pestis putative exported protein ypo3730 SWALL:Q8ZAR1 (EMBL:AJ414158) (233 aa) fasta scores: E(): 7.2e-42, 50.87% id in 230 aa, and to Salmonella typhi hypothetical protein sty3714 SWALL:Q8Z330 (EMBL:AL627279) (230 aa) fasta scores: E(): 3.3e-30, 38.69% id in 230 aa.	Endonuclease V (pseudogene); 1 probable transmembrane helix predicted for ECA0236 by TMHMM2.0 at aa 102-124.	0.482
ECA0239	parC	ECA0239	ECA0345	Similar to Yersinia pestis putative exported protein ypo3730 SWALL:Q8ZAR1 (EMBL:AJ414158) (233 aa) fasta scores: E(): 7.2e-42, 50.87% id in 230 aa, and to Salmonella typhi hypothetical protein sty3714 SWALL:Q8Z330 (EMBL:AL627279) (230 aa) fasta scores: E(): 3.3e-30, 38.69% id in 230 aa.	Topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.	0.415
hupA	ECA0239	ECA0238	ECA0239	DNA-binding protein HU-alpha; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.	Similar to Yersinia pestis putative exported protein ypo3730 SWALL:Q8ZAR1 (EMBL:AJ414158) (233 aa) fasta scores: E(): 7.2e-42, 50.87% id in 230 aa, and to Salmonella typhi hypothetical protein sty3714 SWALL:Q8Z330 (EMBL:AL627279) (230 aa) fasta scores: E(): 3.3e-30, 38.69% id in 230 aa.	0.804
hupA	nfi	ECA0238	ECA0237	DNA-binding protein HU-alpha; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.	Endonuclease V (pseudogene); 1 probable transmembrane helix predicted for ECA0236 by TMHMM2.0 at aa 102-124.	0.490
nfi	ECA0239	ECA0237	ECA0239	Endonuclease V (pseudogene); 1 probable transmembrane helix predicted for ECA0236 by TMHMM2.0 at aa 102-124.	Similar to Yersinia pestis putative exported protein ypo3730 SWALL:Q8ZAR1 (EMBL:AJ414158) (233 aa) fasta scores: E(): 7.2e-42, 50.87% id in 230 aa, and to Salmonella typhi hypothetical protein sty3714 SWALL:Q8Z330 (EMBL:AL627279) (230 aa) fasta scores: E(): 3.3e-30, 38.69% id in 230 aa.	0.482
nfi	hupA	ECA0237	ECA0238	Endonuclease V (pseudogene); 1 probable transmembrane helix predicted for ECA0236 by TMHMM2.0 at aa 102-124.	DNA-binding protein HU-alpha; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.	0.490
parC	ECA0239	ECA0345	ECA0239	Topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.	Similar to Yersinia pestis putative exported protein ypo3730 SWALL:Q8ZAR1 (EMBL:AJ414158) (233 aa) fasta scores: E(): 7.2e-42, 50.87% id in 230 aa, and to Salmonella typhi hypothetical protein sty3714 SWALL:Q8Z330 (EMBL:AL627279) (230 aa) fasta scores: E(): 3.3e-30, 38.69% id in 230 aa.	0.415

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