Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ECA0239 | hupA | ECA0239 | ECA0238 | Similar to Yersinia pestis putative exported protein ypo3730 SWALL:Q8ZAR1 (EMBL:AJ414158) (233 aa) fasta scores: E(): 7.2e-42, 50.87% id in 230 aa, and to Salmonella typhi hypothetical protein sty3714 SWALL:Q8Z330 (EMBL:AL627279) (230 aa) fasta scores: E(): 3.3e-30, 38.69% id in 230 aa. | DNA-binding protein HU-alpha; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.791 |
| ECA0239 | nfi | ECA0239 | ECA0237 | Similar to Yersinia pestis putative exported protein ypo3730 SWALL:Q8ZAR1 (EMBL:AJ414158) (233 aa) fasta scores: E(): 7.2e-42, 50.87% id in 230 aa, and to Salmonella typhi hypothetical protein sty3714 SWALL:Q8Z330 (EMBL:AL627279) (230 aa) fasta scores: E(): 3.3e-30, 38.69% id in 230 aa. | Endonuclease V (pseudogene); 1 probable transmembrane helix predicted for ECA0236 by TMHMM2.0 at aa 102-124. | 0.484 |
| hupA | ECA0239 | ECA0238 | ECA0239 | DNA-binding protein HU-alpha; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Similar to Yersinia pestis putative exported protein ypo3730 SWALL:Q8ZAR1 (EMBL:AJ414158) (233 aa) fasta scores: E(): 7.2e-42, 50.87% id in 230 aa, and to Salmonella typhi hypothetical protein sty3714 SWALL:Q8Z330 (EMBL:AL627279) (230 aa) fasta scores: E(): 3.3e-30, 38.69% id in 230 aa. | 0.791 |
| hupA | nfi | ECA0238 | ECA0237 | DNA-binding protein HU-alpha; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Endonuclease V (pseudogene); 1 probable transmembrane helix predicted for ECA0236 by TMHMM2.0 at aa 102-124. | 0.473 |
| nfi | ECA0239 | ECA0237 | ECA0239 | Endonuclease V (pseudogene); 1 probable transmembrane helix predicted for ECA0236 by TMHMM2.0 at aa 102-124. | Similar to Yersinia pestis putative exported protein ypo3730 SWALL:Q8ZAR1 (EMBL:AJ414158) (233 aa) fasta scores: E(): 7.2e-42, 50.87% id in 230 aa, and to Salmonella typhi hypothetical protein sty3714 SWALL:Q8Z330 (EMBL:AL627279) (230 aa) fasta scores: E(): 3.3e-30, 38.69% id in 230 aa. | 0.484 |
| nfi | hupA | ECA0237 | ECA0238 | Endonuclease V (pseudogene); 1 probable transmembrane helix predicted for ECA0236 by TMHMM2.0 at aa 102-124. | DNA-binding protein HU-alpha; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.473 |