Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ECA0401 | holC | ECA0401 | ECA0403 | Putative membrane protein; Similar to Streptococcus mutans conserved hypothetical protein smu.1642C SWALL:AAN59281 (EMBL:AE014994) (210 aa) fasta scores: E(): 3.5e-19, 35.92% id in 206 aa. Note that there are no significant database matches to enterobacterial species. | Similar to Escherichia coli DNA polymerase III, chi subunit HolC or b4259 SWALL:HOLC_ECOLI (SWALL:P28905) (147 aa) fasta scores: E(): 1.8e-40, 72.41% id in 145 aa. | 0.440 |
| ECA0401 | valS | ECA0401 | ECA0402 | Putative membrane protein; Similar to Streptococcus mutans conserved hypothetical protein smu.1642C SWALL:AAN59281 (EMBL:AE014994) (210 aa) fasta scores: E(): 3.5e-19, 35.92% id in 206 aa. Note that there are no significant database matches to enterobacterial species. | valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | 0.448 |
| holC | ECA0401 | ECA0403 | ECA0401 | Similar to Escherichia coli DNA polymerase III, chi subunit HolC or b4259 SWALL:HOLC_ECOLI (SWALL:P28905) (147 aa) fasta scores: E(): 1.8e-40, 72.41% id in 145 aa. | Putative membrane protein; Similar to Streptococcus mutans conserved hypothetical protein smu.1642C SWALL:AAN59281 (EMBL:AE014994) (210 aa) fasta scores: E(): 3.5e-19, 35.92% id in 206 aa. Note that there are no significant database matches to enterobacterial species. | 0.440 |
| holC | valS | ECA0403 | ECA0402 | Similar to Escherichia coli DNA polymerase III, chi subunit HolC or b4259 SWALL:HOLC_ECOLI (SWALL:P28905) (147 aa) fasta scores: E(): 1.8e-40, 72.41% id in 145 aa. | valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | 0.791 |
| valS | ECA0401 | ECA0402 | ECA0401 | valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | Putative membrane protein; Similar to Streptococcus mutans conserved hypothetical protein smu.1642C SWALL:AAN59281 (EMBL:AE014994) (210 aa) fasta scores: E(): 3.5e-19, 35.92% id in 206 aa. Note that there are no significant database matches to enterobacterial species. | 0.448 |
| valS | holC | ECA0402 | ECA0403 | valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | Similar to Escherichia coli DNA polymerase III, chi subunit HolC or b4259 SWALL:HOLC_ECOLI (SWALL:P28905) (147 aa) fasta scores: E(): 1.8e-40, 72.41% id in 145 aa. | 0.791 |