Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ECA1014Putative membrane protein; Similar to Saccharomyces cerevisiae hypothetical 11.6 kDa protein in nut1-aro2 intergenic region precursor ygl149w or g1895 SWALL:YGO9_YEAST (SWALL:P53116) (101 aa) fasta scores: E(): 4.7, 37.09% id in 62 aa, and to Streptococcus pyogenes hypothetical protein Spym3_0087 spym3_0087 SWALL:Q8K8V4 (EMBL:AE014138) (102 aa) fasta scores: E(): 4.8, 33.33% id in 60 aa. (72 aa)    
Predicted Functional Partners:
gcvA
Glycine cleavage system transcriptional activator; Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 glycine cleavage system transcriptional activator GcvA or b2808 or c3378 or z4125 or ecs3668 SWALL:GCVA_ECOLI (SWALL:P32064) (305 aa) fasta scores: E(): 1.1e-112, 91.44% id in 304 aa, and to Shigella flexneri positive regulator of gcv operon GcvA or sf2822 SWALL:AAN44309 (EMBL:AE015295) (305 aa) fasta scores: E(): 1.5e-112, 91.44% id in 304 aa; Belongs to the LysR transcriptional regulatory family.
       0.432
Your Current Organism:
Pectobacterium atrosepticum
NCBI taxonomy Id: 218491
Other names: Erwinia carotovora subsp. atroseptica SCRI1043, Erwinia carotovora subsp. atroseptica str. SCRI1043, P. atrosepticum SCRI1043, Pectobacterium atrosepticum SCRI1043, Pectobacterium atrosepticum str. SCRI1043, Pectobacterium atrosepticum strain SCRI1043, Pectobacterium carotovora subsp. atroseptica SCRI1043, Pectobacterium carotovora subsp. atroseptica str. SCRI1043
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.